Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 KRT18P64-201ENST00000434946 1219 ntBASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 AC007686.3-201ENST00000619017 3487 ntBASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC83Q8IWF9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AC254562.1-201ENST00000417586 456 ntBASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AL596442.2-201ENST00000610240 980 ntBASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AC134684.3-201ENST00000641758 218 ntBASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC83Q8IWF9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms