Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 SPDYE14P-201ENST00000442619 822 ntBASIC15.24■□□□□ 0.03
SGO1Q5FBB7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 AC097359.3-201ENST00000603982 1210 ntBASIC15.24■□□□□ 0.03
SGO1Q5FBB7 MIR6080-201ENST00000617359 66 ntBASIC15.24■□□□□ 0.03
SGO1Q5FBB7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.24■□□□□ 0.03
SGO1Q5FBB7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.23■□□□□ 0.03
SGO1Q5FBB7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 AC006058.4-201ENST00000624016 1670 ntBASIC15.23■□□□□ 0.03
SGO1Q5FBB7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 EEF1DP4-201ENST00000446006 880 ntBASIC15.23■□□□□ 0.03
SGO1Q5FBB7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.23■□□□□ 0.03
SGO1Q5FBB7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms