Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 SPDYE19P-201ENST00000338590 713 ntBASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 SERBP1P5-201ENST00000510079 1181 ntBASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 TPRX2P-201ENST00000535362 881 ntBASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 SPCS2P1-201ENST00000561636 679 ntBASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN20Q4JDL3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN20Q4JDL3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN20Q4JDL3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 SPTLC1P1-201ENST00000447199 261 ntBASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN20Q4JDL3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 TSPY16P-201ENST00000449843 468 ntBASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 RARRES2P5-201ENST00000564013 466 ntBASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 AL096865.1-201ENST00000606796 927 ntBASIC16.38■□□□□ 0.21
PTPN20Q4JDL3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms