Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHRFAM7AQ494W8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
CHRFAM7AQ494W8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CHRFAM7AQ494W8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 AC092580.3-201ENST00000430932 139 ntBASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 IGHV3-71-201ENST00000523324 359 ntBASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 TNRC18P2-201ENST00000417666 2714 ntBASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRFAM7AQ494W8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 SSR4P1-203ENST00000599569 2260 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AC012569.1-201ENST00000591191 1524 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 WASH6P-202ENST00000359512 1437 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 HMGA1P7-201ENST00000406908 502 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 ARSEP1-201ENST00000420443 635 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AC107918.2-201ENST00000530817 355 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AC008267.7-201ENST00000624570 1194 ntBASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRFAM7AQ494W8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CHRFAM7AQ494W8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms