Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 TMPOP1-202ENST00000424642 1267 ntBASIC13.24□□□□□ -0.29
SSBP1Q04837 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.24□□□□□ -0.29
SSBP1Q04837 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SSBP1Q04837 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.24□□□□□ -0.29
SSBP1Q04837 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP1Q04837 HNRNPUP1-201ENST00000554987 333 ntBASIC13.24□□□□□ -0.29
SSBP1Q04837 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.24□□□□□ -0.29
SSBP1Q04837 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP1Q04837 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 INTS4P1-203ENST00000641008 3683 ntBASIC13.24□□□□□ -0.29
SSBP1Q04837 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 MTHFR-210ENST00000641407 2387 ntBASIC13.24□□□□□ -0.29
SSBP1Q04837 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 AC126335.2-201ENST00000623362 4637 ntBASIC13.24□□□□□ -0.29
SSBP1Q04837 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.23□□□□□ -0.29
SSBP1Q04837 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 AC010327.5-201ENST00000586923 3061 ntBASIC13.23□□□□□ -0.29
SSBP1Q04837 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 AC136604.1-201ENST00000418535 575 ntBASIC13.23□□□□□ -0.29
SSBP1Q04837 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.23□□□□□ -0.29
SSBP1Q04837 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.23□□□□□ -0.29
SSBP1Q04837 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP1Q04837 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SSBP1Q04837 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP1Q04837 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP1Q04837 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms