Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC9.35□□□□□ -0.91
HSPG2P98160 HLA-K-203ENST00000430151 1046 ntBASIC9.35□□□□□ -0.91
HSPG2P98160 IGKV1OR-2-201ENST00000457995 350 ntBASIC9.35□□□□□ -0.91
HSPG2P98160 RBM4-207ENST00000506523 654 ntTSL 3 BASIC9.35□□□□□ -0.91
HSPG2P98160 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HSPG2P98160 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC9.35□□□□□ -0.91
HSPG2P98160 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC9.35□□□□□ -0.91
HSPG2P98160 MIR5001-201ENST00000580185 100 ntBASIC9.35□□□□□ -0.91
HSPG2P98160 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC9.35□□□□□ -0.91
HSPG2P98160 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 AC025183.3-201ENST00000623526 1482 ntBASIC9.35□□□□□ -0.91
HSPG2P98160 AC011477.6-201ENST00000604980 1927 ntBASIC9.35□□□□□ -0.91
HSPG2P98160 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
HSPG2P98160 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC9.35□□□□□ -0.91
HSPG2P98160 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC9.35□□□□□ -0.91
HSPG2P98160 EMC4-208ENST00000559078 599 ntTSL 3 BASIC9.35□□□□□ -0.91
HSPG2P98160 AC068867.1-201ENST00000559855 150 ntBASIC9.35□□□□□ -0.91
HSPG2P98160 ELP5-212ENST00000574255 671 ntTSL 2 BASIC9.35□□□□□ -0.91
HSPG2P98160 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC9.35□□□□□ -0.91
HSPG2P98160 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HSPG2P98160 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HSPG2P98160 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
HSPG2P98160 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.34□□□□□ -0.91
HSPG2P98160 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 AL138725.1-201ENST00000407347 1314 ntBASIC9.34□□□□□ -0.91
HSPG2P98160 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
HSPG2P98160 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC9.34□□□□□ -0.91
HSPG2P98160 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC9.34□□□□□ -0.91
HSPG2P98160 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
HSPG2P98160 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC9.34□□□□□ -0.91
HSPG2P98160 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC9.34□□□□□ -0.91
HSPG2P98160 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
HSPG2P98160 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC9.34□□□□□ -0.91
HSPG2P98160 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 AC073592.2-201ENST00000623062 780 ntBASIC9.34□□□□□ -0.91
HSPG2P98160 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC9.34□□□□□ -0.91
HSPG2P98160 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 ABR-203ENST00000536794 2213 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC9.34□□□□□ -0.91
HSPG2P98160 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC9.34□□□□□ -0.91
HSPG2P98160 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC9.34□□□□□ -0.91
HSPG2P98160 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC9.34□□□□□ -0.91
HSPG2P98160 AC009145.4-201ENST00000625119 1294 ntBASIC9.34□□□□□ -0.91
HSPG2P98160 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
HSPG2P98160 AC007292.2-201ENST00000593524 1812 ntBASIC9.34□□□□□ -0.91
HSPG2P98160 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 WASH7P-201ENST00000488147 1351 ntBASIC9.34□□□□□ -0.91
HSPG2P98160 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HSPG2P98160 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
HSPG2P98160 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HSPG2P98160 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
HSPG2P98160 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
HSPG2P98160 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HSPG2P98160 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
HSPG2P98160 RN7SKP230-201ENST00000365642 335 ntBASIC9.33□□□□□ -0.92
HSPG2P98160 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC9.33□□□□□ -0.92
HSPG2P98160 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC9.33□□□□□ -0.92
HSPG2P98160 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
HSPG2P98160 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC9.33□□□□□ -0.92
HSPG2P98160 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
HSPG2P98160 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms