Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.35■□□□□ 0.21
IRX4P78413 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX4P78413 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.35■□□□□ 0.21
IRX4P78413 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IRX4P78413 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.35■□□□□ 0.21
IRX4P78413 RN7SL828P-201ENST00000607615 303 ntBASIC16.35■□□□□ 0.21
IRX4P78413 AL162274.1-201ENST00000617191 1098 ntBASIC16.35■□□□□ 0.21
IRX4P78413 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.35■□□□□ 0.21
IRX4P78413 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX4P78413 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IRX4P78413 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
IRX4P78413 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IRX4P78413 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
IRX4P78413 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
IRX4P78413 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 AL512384.1-201ENST00000406683 331 ntBASIC16.34■□□□□ 0.21
IRX4P78413 ACA64.2-201ENST00000459014 129 ntBASIC16.34■□□□□ 0.21
IRX4P78413 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.34■□□□□ 0.21
IRX4P78413 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX4P78413 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX4P78413 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IRX4P78413 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IRX4P78413 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IRX4P78413 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.34■□□□□ 0.21
IRX4P78413 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IRX4P78413 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.33■□□□□ 0.21
IRX4P78413 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
IRX4P78413 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.33■□□□□ 0.21
IRX4P78413 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX4P78413 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
IRX4P78413 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
IRX4P78413 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX4P78413 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.33■□□□□ 0.2
IRX4P78413 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX4P78413 MIR1909-201ENST00000411312 80 ntBASIC16.33■□□□□ 0.2
IRX4P78413 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX4P78413 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
IRX4P78413 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.33■□□□□ 0.2
IRX4P78413 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.33■□□□□ 0.2
IRX4P78413 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX4P78413 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.33■□□□□ 0.2
IRX4P78413 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.33■□□□□ 0.2
IRX4P78413 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.33■□□□□ 0.2
IRX4P78413 AC097376.2-205ENST00000610159 5334 ntBASIC16.33■□□□□ 0.2
IRX4P78413 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX4P78413 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms