Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CXCR4P61073 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCR4P61073 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCR4P61073 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 AC004987.2-201ENST00000395959 1148 ntBASIC14.27□□□□□ -0.13
CXCR4P61073 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 AC009947.1-201ENST00000444350 727 ntBASIC14.27□□□□□ -0.13
CXCR4P61073 AC079781.3-201ENST00000449110 356 ntBASIC14.27□□□□□ -0.13
CXCR4P61073 HCG4B-203ENST00000450128 991 ntBASIC14.27□□□□□ -0.13
CXCR4P61073 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CXCR4P61073 UNC93B6-202ENST00000528242 690 ntBASIC14.27□□□□□ -0.13
CXCR4P61073 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCR4P61073 AC096734.2-201ENST00000562054 433 ntBASIC14.27□□□□□ -0.13
CXCR4P61073 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.27□□□□□ -0.13
CXCR4P61073 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCR4P61073 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CXCR4P61073 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CXCR4P61073 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCR4P61073 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCR4P61073 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CXCR4P61073 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCR4P61073 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCR4P61073 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 AL031284.1-201ENST00000419297 478 ntBASIC14.26□□□□□ -0.13
CXCR4P61073 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 RHOQP3-201ENST00000437982 621 ntBASIC14.26□□□□□ -0.13
CXCR4P61073 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCR4P61073 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.26□□□□□ -0.13
CXCR4P61073 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCR4P61073 AC023141.13-201ENST00000604991 943 ntBASIC14.26□□□□□ -0.13
CXCR4P61073 AC007064.4-201ENST00000637740 555 ntBASIC14.26□□□□□ -0.13
CXCR4P61073 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCR4P61073 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCR4P61073 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCR4P61073 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCR4P61073 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CXCR4P61073 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.25□□□□□ -0.13
CXCR4P61073 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CXCR4P61073 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCR4P61073 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.25□□□□□ -0.13
CXCR4P61073 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.25□□□□□ -0.13
CXCR4P61073 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms