Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CTBP2P5-201ENST00000454986 1264 ntBASIC16.75■□□□□ 0.27
VCPP55072 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.75■□□□□ 0.27
VCPP55072 RNA5SP423-201ENST00000517127 109 ntBASIC16.75■□□□□ 0.27
VCPP55072 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.75■□□□□ 0.27
VCPP55072 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.75■□□□□ 0.27
VCPP55072 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
VCPP55072 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.75■□□□□ 0.27
VCPP55072 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.75■□□□□ 0.27
VCPP55072 AC015936.2-201ENST00000593177 259 ntBASIC16.75■□□□□ 0.27
VCPP55072 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VCPP55072 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
VCPP55072 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.75■□□□□ 0.27
VCPP55072 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.75■□□□□ 0.27
VCPP55072 AC073347.1-201ENST00000421633 2643 ntBASIC16.75■□□□□ 0.27
VCPP55072 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.75■□□□□ 0.27
VCPP55072 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
VCPP55072 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
VCPP55072 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.74■□□□□ 0.27
VCPP55072 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VCPP55072 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.74■□□□□ 0.27
VCPP55072 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.74■□□□□ 0.27
VCPP55072 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.74■□□□□ 0.27
VCPP55072 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.74■□□□□ 0.27
VCPP55072 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.74■□□□□ 0.27
VCPP55072 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.74■□□□□ 0.27
VCPP55072 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.74■□□□□ 0.27
VCPP55072 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.74■□□□□ 0.27
VCPP55072 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
VCPP55072 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
VCPP55072 MIR3615-201ENST00000581999 87 ntBASIC16.74■□□□□ 0.27
VCPP55072 BTNL10-201ENST00000595971 695 ntBASIC16.74■□□□□ 0.27
VCPP55072 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.74■□□□□ 0.27
VCPP55072 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VCPP55072 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.74■□□□□ 0.27
VCPP55072 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.74■□□□□ 0.27
VCPP55072 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCPP55072 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.73■□□□□ 0.27
VCPP55072 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.73■□□□□ 0.27
VCPP55072 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VCPP55072 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.73■□□□□ 0.27
VCPP55072 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.73■□□□□ 0.27
VCPP55072 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VCPP55072 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.73■□□□□ 0.27
VCPP55072 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.73■□□□□ 0.27
VCPP55072 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
VCPP55072 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.73■□□□□ 0.27
VCPP55072 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VCPP55072 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.73■□□□□ 0.27
VCPP55072 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.73■□□□□ 0.27
VCPP55072 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VCPP55072 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VCPP55072 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.73■□□□□ 0.27
VCPP55072 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VCPP55072 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.73■□□□□ 0.27
VCPP55072 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.73■□□□□ 0.27
VCPP55072 AC099336.1-201ENST00000417053 1171 ntBASIC16.73■□□□□ 0.27
VCPP55072 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCPP55072 KRT43P-201ENST00000434019 910 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms