Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPT1AP50416 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPT1AP50416 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.14■□□□□ 0.33
CPT1AP50416 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CPT1AP50416 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPT1AP50416 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.13■□□□□ 0.33
CPT1AP50416 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.13■□□□□ 0.33
CPT1AP50416 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPT1AP50416 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.13■□□□□ 0.33
CPT1AP50416 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
CPT1AP50416 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.13■□□□□ 0.33
CPT1AP50416 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.13■□□□□ 0.33
CPT1AP50416 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.13■□□□□ 0.33
CPT1AP50416 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPT1AP50416 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.13■□□□□ 0.33
CPT1AP50416 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CPT1AP50416 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.13■□□□□ 0.33
CPT1AP50416 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPT1AP50416 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.13■□□□□ 0.33
CPT1AP50416 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 AL023775.1-201ENST00000454907 1746 ntBASIC17.13■□□□□ 0.33
CPT1AP50416 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPT1AP50416 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CPT1AP50416 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
CPT1AP50416 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.12■□□□□ 0.33
CPT1AP50416 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.12■□□□□ 0.33
CPT1AP50416 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.12■□□□□ 0.33
CPT1AP50416 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.12■□□□□ 0.33
CPT1AP50416 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.12■□□□□ 0.33
CPT1AP50416 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.12■□□□□ 0.33
CPT1AP50416 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.12■□□□□ 0.33
CPT1AP50416 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.12■□□□□ 0.33
CPT1AP50416 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.12■□□□□ 0.33
CPT1AP50416 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.12■□□□□ 0.33
CPT1AP50416 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.12■□□□□ 0.33
CPT1AP50416 HSPB1P2-201ENST00000448722 546 ntBASIC17.12■□□□□ 0.33
CPT1AP50416 IGHJ2P-201ENST00000454480 60 ntBASIC17.12■□□□□ 0.33
CPT1AP50416 COX5BP1-201ENST00000507622 393 ntBASIC17.12■□□□□ 0.33
CPT1AP50416 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CPT1AP50416 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.12■□□□□ 0.33
CPT1AP50416 AC244157.2-201ENST00000616239 1006 ntBASIC17.12■□□□□ 0.33
CPT1AP50416 AL603764.1-201ENST00000636452 321 ntBASIC17.12■□□□□ 0.33
CPT1AP50416 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.12■□□□□ 0.33
CPT1AP50416 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPT1AP50416 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPT1AP50416 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CPT1AP50416 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPT1AP50416 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPT1AP50416 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPT1AP50416 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPT1AP50416 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.11■□□□□ 0.33
CPT1AP50416 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms