Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFSF9P41273 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 AC112693.3-201ENST00000624819 1983 ntBASIC16.81■□□□□ 0.28
TNFSF9P41273 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TNFSF9P41273 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFSF9P41273 TTTY23B-201ENST00000442790 549 ntBASIC16.81■□□□□ 0.28
TNFSF9P41273 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFSF9P41273 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFSF9P41273 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TNFSF9P41273 MSTO2P-201ENST00000314835 1709 ntBASIC16.81■□□□□ 0.28
TNFSF9P41273 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TNFSF9P41273 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFSF9P41273 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TNFSF9P41273 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TNFSF9P41273 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.8■□□□□ 0.28
TNFSF9P41273 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.8■□□□□ 0.28
TNFSF9P41273 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TNFSF9P41273 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.8■□□□□ 0.28
TNFSF9P41273 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.8■□□□□ 0.28
TNFSF9P41273 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TNFSF9P41273 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF9P41273 AL138799.1-201ENST00000448213 1675 ntBASIC16.8■□□□□ 0.28
TNFSF9P41273 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF9P41273 PPT1-215ENST00000641471 2368 ntBASIC16.8■□□□□ 0.28
TNFSF9P41273 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF9P41273 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF9P41273 C18orf15-201ENST00000623680 2534 ntBASIC16.79■□□□□ 0.28
TNFSF9P41273 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF9P41273 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TNFSF9P41273 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF9P41273 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF9P41273 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNFSF9P41273 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNFSF9P41273 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.79■□□□□ 0.28
TNFSF9P41273 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF9P41273 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms