Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KRT19P2-202ENST00000557173 1012 ntBASIC13.68□□□□□ -0.22
GDNFP39905 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 AC023141.13-201ENST00000604991 943 ntBASIC13.68□□□□□ -0.22
GDNFP39905 AL031055.1-201ENST00000606362 631 ntBASIC13.68□□□□□ -0.22
GDNFP39905 AL645728.2-201ENST00000641974 660 ntBASIC13.68□□□□□ -0.22
GDNFP39905 AC092865.6-201ENST00000642101 219 ntBASIC13.68□□□□□ -0.22
GDNFP39905 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GDNFP39905 LINC01230-201ENST00000625222 3017 ntBASIC13.68□□□□□ -0.22
GDNFP39905 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GDNFP39905 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
GDNFP39905 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 AC067750.1-201ENST00000608826 6545 ntBASIC13.67□□□□□ -0.22
GDNFP39905 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GDNFP39905 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 WASH6P-202ENST00000359512 1437 ntBASIC13.67□□□□□ -0.22
GDNFP39905 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 AC079781.5-202ENST00000641784 3743 ntBASIC13.67□□□□□ -0.22
GDNFP39905 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.67□□□□□ -0.22
GDNFP39905 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 AL022342.1-201ENST00000400363 863 ntBASIC13.67□□□□□ -0.22
GDNFP39905 MIR940-201ENST00000401276 94 ntBASIC13.67□□□□□ -0.22
GDNFP39905 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.67□□□□□ -0.22
GDNFP39905 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.67□□□□□ -0.22
GDNFP39905 AP000347.1-202ENST00000435868 847 ntBASIC13.67□□□□□ -0.22
GDNFP39905 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GDNFP39905 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.67□□□□□ -0.22
GDNFP39905 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.67□□□□□ -0.22
GDNFP39905 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GDNFP39905 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
GDNFP39905 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.67□□□□□ -0.22
GDNFP39905 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GDNFP39905 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.67□□□□□ -0.22
GDNFP39905 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GDNFP39905 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.67□□□□□ -0.22
GDNFP39905 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
GDNFP39905 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDNFP39905 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.67□□□□□ -0.22
GDNFP39905 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.66□□□□□ -0.22
GDNFP39905 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 ZBED1P1-201ENST00000502364 1930 ntBASIC13.66□□□□□ -0.22
GDNFP39905 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 AC134407.2-201ENST00000625089 1978 ntBASIC13.66□□□□□ -0.22
GDNFP39905 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDNFP39905 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms