Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.51■□□□□ 0.23
PCK1P35558 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.51■□□□□ 0.23
PCK1P35558 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.51■□□□□ 0.23
PCK1P35558 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.51■□□□□ 0.23
PCK1P35558 AC015911.4-201ENST00000588022 1070 ntBASIC16.51■□□□□ 0.23
PCK1P35558 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 AL589739.1-201ENST00000607720 493 ntBASIC16.51■□□□□ 0.23
PCK1P35558 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 CETN4P-206ENST00000642099 2168 ntBASIC16.51■□□□□ 0.23
PCK1P35558 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCK1P35558 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCK1P35558 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.5■□□□□ 0.23
PCK1P35558 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCK1P35558 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCK1P35558 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCK1P35558 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 AL080243.2-201ENST00000418783 582 ntBASIC16.5■□□□□ 0.23
PCK1P35558 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.5■□□□□ 0.23
PCK1P35558 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCK1P35558 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.5■□□□□ 0.23
PCK1P35558 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.5■□□□□ 0.23
PCK1P35558 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCK1P35558 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.5■□□□□ 0.23
PCK1P35558 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.5■□□□□ 0.23
PCK1P35558 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.5■□□□□ 0.23
PCK1P35558 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.5■□□□□ 0.23
PCK1P35558 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.5■□□□□ 0.23
PCK1P35558 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCK1P35558 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCK1P35558 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 AC009090.5-201ENST00000624886 2285 ntBASIC16.49■□□□□ 0.23
PCK1P35558 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.49■□□□□ 0.23
PCK1P35558 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms