Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 CICP11-201ENST00000434745 2827 ntBASIC14.82□□□□□ -0.04
NCK1P16333 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NCK1P16333 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 PHKG1P2-201ENST00000457537 863 ntBASIC14.81□□□□□ -0.04
NCK1P16333 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.81□□□□□ -0.04
NCK1P16333 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.81□□□□□ -0.04
NCK1P16333 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 AL161645.1-201ENST00000622716 1255 ntBASIC14.81□□□□□ -0.04
NCK1P16333 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 AC041040.2-201ENST00000622926 2899 ntBASIC14.81□□□□□ -0.04
NCK1P16333 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NCK1P16333 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NCK1P16333 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NCK1P16333 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.8□□□□□ -0.04
NCK1P16333 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NCK1P16333 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.8□□□□□ -0.04
NCK1P16333 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NCK1P16333 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NCK1P16333 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.8□□□□□ -0.04
NCK1P16333 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 AL031284.1-201ENST00000419297 478 ntBASIC14.8□□□□□ -0.04
NCK1P16333 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.8□□□□□ -0.04
NCK1P16333 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NCK1P16333 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 AC073389.1-201ENST00000595595 795 ntBASIC14.8□□□□□ -0.04
NCK1P16333 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms