Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RARBP10826 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RARBP10826 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.4■□□□□ 0.38
RARBP10826 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 AC006449.6-201ENST00000612330 2296 ntBASIC17.4■□□□□ 0.38
RARBP10826 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.4■□□□□ 0.38
RARBP10826 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RARBP10826 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RARBP10826 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.4■□□□□ 0.38
RARBP10826 ACTBP8-201ENST00000403258 1108 ntBASIC17.4■□□□□ 0.38
RARBP10826 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.4■□□□□ 0.38
RARBP10826 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.4■□□□□ 0.38
RARBP10826 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 AC005077.2-201ENST00000449786 690 ntBASIC17.4■□□□□ 0.38
RARBP10826 BX284668.4-201ENST00000453917 508 ntBASIC17.4■□□□□ 0.38
RARBP10826 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.4■□□□□ 0.38
RARBP10826 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.4■□□□□ 0.38
RARBP10826 AL096828.3-201ENST00000615354 462 ntBASIC17.4■□□□□ 0.38
RARBP10826 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.4■□□□□ 0.38
RARBP10826 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.4■□□□□ 0.38
RARBP10826 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RARBP10826 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARBP10826 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
RARBP10826 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RARBP10826 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RARBP10826 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RARBP10826 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
RARBP10826 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
RARBP10826 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 TPM3P8-201ENST00000330554 643 ntBASIC17.39■□□□□ 0.37
RARBP10826 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RARBP10826 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 MIR648-201ENST00000385046 94 ntBASIC17.39■□□□□ 0.37
RARBP10826 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.39■□□□□ 0.37
RARBP10826 KLF2P2-201ENST00000416807 1039 ntBASIC17.39■□□□□ 0.37
RARBP10826 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 AC114812.1-204ENST00000449669 728 ntBASIC17.39■□□□□ 0.37
RARBP10826 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.39■□□□□ 0.37
RARBP10826 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.39■□□□□ 0.37
RARBP10826 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.39■□□□□ 0.37
RARBP10826 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RARBP10826 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RARBP10826 RN7SL48P-201ENST00000579283 293 ntBASIC17.39■□□□□ 0.37
RARBP10826 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.39■□□□□ 0.37
RARBP10826 ECM1P1-201ENST00000604092 1279 ntBASIC17.39■□□□□ 0.37
RARBP10826 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RARBP10826 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.39■□□□□ 0.37
RARBP10826 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.39■□□□□ 0.37
RARBP10826 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RARBP10826 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 AC011477.6-201ENST00000604980 1927 ntBASIC17.39■□□□□ 0.37
RARBP10826 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARBP10826 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RARBP10826 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms