Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM2P07951 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM2P07951 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 AC140479.7-201ENST00000636301 2332 ntBASIC17.88■□□□□ 0.45
TPM2P07951 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TPM2P07951 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TPM2P07951 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TPM2P07951 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM2P07951 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM2P07951 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM2P07951 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TPM2P07951 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TPM2P07951 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TPM2P07951 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM2P07951 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM2P07951 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM2P07951 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.87■□□□□ 0.45
TPM2P07951 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.87■□□□□ 0.45
TPM2P07951 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.87■□□□□ 0.45
TPM2P07951 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.87■□□□□ 0.45
TPM2P07951 AC007064.4-201ENST00000637740 555 ntBASIC17.87■□□□□ 0.45
TPM2P07951 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TPM2P07951 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.87■□□□□ 0.45
TPM2P07951 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TPM2P07951 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TPM2P07951 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.87■□□□□ 0.45
TPM2P07951 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TPM2P07951 AL139385.1-201ENST00000611744 3272 ntBASIC17.87■□□□□ 0.45
TPM2P07951 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM2P07951 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TPM2P07951 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM2P07951 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 HSPA7-201ENST00000445535 1927 ntBASIC17.86■□□□□ 0.45
TPM2P07951 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.86■□□□□ 0.45
TPM2P07951 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 AC093724.1-201ENST00000448659 1027 ntBASIC17.86■□□□□ 0.45
TPM2P07951 AC245100.5-201ENST00000452108 331 ntBASIC17.86■□□□□ 0.45
TPM2P07951 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM2P07951 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM2P07951 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM2P07951 AC109635.5-201ENST00000533593 962 ntBASIC17.86■□□□□ 0.45
TPM2P07951 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 AC148477.8-201ENST00000624298 468 ntBASIC17.86■□□□□ 0.45
TPM2P07951 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TPM2P07951 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TPM2P07951 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM2P07951 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms