Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 AC005237.2-201ENST00000434368 219 ntBASIC13.9□□□□□ -0.18
APOC1P02654 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.9□□□□□ -0.18
APOC1P02654 SLC25A39P2-201ENST00000537614 270 ntBASIC13.9□□□□□ -0.18
APOC1P02654 MIR3687-2-201ENST00000577708 61 ntBASIC13.9□□□□□ -0.18
APOC1P02654 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 MIR3687-1-201ENST00000614492 61 ntBASIC13.9□□□□□ -0.18
APOC1P02654 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
APOC1P02654 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
APOC1P02654 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.89□□□□□ -0.19
APOC1P02654 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 AL645939.2-201ENST00000427340 991 ntBASIC13.89□□□□□ -0.19
APOC1P02654 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 AC069335.1-201ENST00000489972 472 ntBASIC13.89□□□□□ -0.19
APOC1P02654 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.89□□□□□ -0.19
APOC1P02654 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.89□□□□□ -0.19
APOC1P02654 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.89□□□□□ -0.19
APOC1P02654 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 CR383656.2-201ENST00000548656 2254 ntBASIC13.89□□□□□ -0.19
APOC1P02654 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 SSR4P1-203ENST00000599569 2260 ntBASIC13.89□□□□□ -0.19
APOC1P02654 AC005252.3-201ENST00000623855 2258 ntBASIC13.89□□□□□ -0.19
APOC1P02654 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
APOC1P02654 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC1P02654 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC1P02654 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC1P02654 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC1P02654 AL136982.4-201ENST00000437689 1740 ntBASIC13.88□□□□□ -0.19
APOC1P02654 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms