Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.88■□□□□ 0.45
COL2A1P02458 AL358472.3-201ENST00000608147 415 ntBASIC17.88■□□□□ 0.45
COL2A1P02458 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL2A1P02458 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.88■□□□□ 0.45
COL2A1P02458 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL2A1P02458 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.88■□□□□ 0.45
COL2A1P02458 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL2A1P02458 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.87■□□□□ 0.45
COL2A1P02458 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
COL2A1P02458 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL2A1P02458 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.87■□□□□ 0.45
COL2A1P02458 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
COL2A1P02458 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.87■□□□□ 0.45
COL2A1P02458 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.87■□□□□ 0.45
COL2A1P02458 AC010141.1-201ENST00000411585 623 ntBASIC17.87■□□□□ 0.45
COL2A1P02458 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.87■□□□□ 0.45
COL2A1P02458 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.87■□□□□ 0.45
COL2A1P02458 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.87■□□□□ 0.45
COL2A1P02458 AC106872.11-201ENST00000605838 421 ntBASIC17.87■□□□□ 0.45
COL2A1P02458 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.87■□□□□ 0.45
COL2A1P02458 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
COL2A1P02458 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL2A1P02458 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL2A1P02458 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COL2A1P02458 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.87■□□□□ 0.45
COL2A1P02458 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL2A1P02458 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.87■□□□□ 0.45
COL2A1P02458 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL2A1P02458 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL2A1P02458 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
COL2A1P02458 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.86■□□□□ 0.45
COL2A1P02458 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 MIR3619-201ENST00000579667 83 ntBASIC17.86■□□□□ 0.45
COL2A1P02458 NDUFV2P1-201ENST00000596415 907 ntBASIC17.86■□□□□ 0.45
COL2A1P02458 AC009955.4-201ENST00000597192 544 ntBASIC17.86■□□□□ 0.45
COL2A1P02458 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.86■□□□□ 0.45
COL2A1P02458 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
COL2A1P02458 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.86■□□□□ 0.45
COL2A1P02458 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.86■□□□□ 0.45
COL2A1P02458 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL2A1P02458 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.86■□□□□ 0.45
COL2A1P02458 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL2A1P02458 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.85■□□□□ 0.45
COL2A1P02458 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.85■□□□□ 0.45
COL2A1P02458 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 SLC25A24P2-201ENST00000415059 510 ntBASIC17.85■□□□□ 0.45
COL2A1P02458 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.85■□□□□ 0.45
COL2A1P02458 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 AC013355.1-201ENST00000562625 723 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms