Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.15■□□□□ 0.34
CD4P01730 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.15■□□□□ 0.34
CD4P01730 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CD4P01730 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD4P01730 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.15■□□□□ 0.34
CD4P01730 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD4P01730 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.15■□□□□ 0.34
CD4P01730 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD4P01730 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD4P01730 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
CD4P01730 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CD4P01730 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CD4P01730 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CD4P01730 AC018892.3-201ENST00000623986 2499 ntBASIC17.14■□□□□ 0.34
CD4P01730 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
CD4P01730 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
CD4P01730 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 MIR663B-201ENST00000408361 115 ntBASIC17.14■□□□□ 0.33
CD4P01730 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.14■□□□□ 0.33
CD4P01730 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.14■□□□□ 0.33
CD4P01730 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.14■□□□□ 0.33
CD4P01730 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.14■□□□□ 0.33
CD4P01730 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.14■□□□□ 0.33
CD4P01730 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.14■□□□□ 0.33
CD4P01730 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.14■□□□□ 0.33
CD4P01730 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CD4P01730 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.14■□□□□ 0.33
CD4P01730 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.14■□□□□ 0.33
CD4P01730 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.14■□□□□ 0.33
CD4P01730 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.14■□□□□ 0.33
CD4P01730 BX539320.1-201ENST00000623759 877 ntBASIC17.14■□□□□ 0.33
CD4P01730 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CD4P01730 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.14■□□□□ 0.33
CD4P01730 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD4P01730 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.14■□□□□ 0.33
CD4P01730 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.14■□□□□ 0.33
CD4P01730 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.13■□□□□ 0.33
CD4P01730 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.13■□□□□ 0.33
CD4P01730 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CD4P01730 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.13■□□□□ 0.33
CD4P01730 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CD4P01730 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.13■□□□□ 0.33
CD4P01730 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
CD4P01730 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.13■□□□□ 0.33
CD4P01730 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.13■□□□□ 0.33
CD4P01730 AL662890.1-201ENST00000396818 632 ntBASIC17.13■□□□□ 0.33
CD4P01730 ACTBP8-201ENST00000403258 1108 ntBASIC17.13■□□□□ 0.33
CD4P01730 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.13■□□□□ 0.33
CD4P01730 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.13■□□□□ 0.33
CD4P01730 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.13■□□□□ 0.33
CD4P01730 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.13■□□□□ 0.33
CD4P01730 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.13■□□□□ 0.33
CD4P01730 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.13■□□□□ 0.33
CD4P01730 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.13■□□□□ 0.33
CD4P01730 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CD4P01730 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD4P01730 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.12■□□□□ 0.33
CD4P01730 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.12■□□□□ 0.33
CD4P01730 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CD4P01730 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.12■□□□□ 0.33
CD4P01730 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.12■□□□□ 0.33
CD4P01730 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.12■□□□□ 0.33
CD4P01730 CNN2P10-201ENST00000443067 918 ntBASIC17.12■□□□□ 0.33
CD4P01730 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.12■□□□□ 0.33
CD4P01730 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.12■□□□□ 0.33
CD4P01730 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.12■□□□□ 0.33
CD4P01730 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CD4P01730 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.12■□□□□ 0.33
CD4P01730 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.12■□□□□ 0.33
CD4P01730 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.12■□□□□ 0.33
CD4P01730 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD4P01730 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD4P01730 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms