Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 CLUHP2-201ENST00000426660 1303 ntBASIC17.53■□□□□ 0.4
ALDH1A1P00352 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 AC025271.4-201ENST00000621477 1726 ntBASIC17.53■□□□□ 0.4
ALDH1A1P00352 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 KRT18P66-201ENST00000452970 1269 ntBASIC17.53■□□□□ 0.4
ALDH1A1P00352 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 RCC2P8-201ENST00000502779 1035 ntBASIC17.53■□□□□ 0.4
ALDH1A1P00352 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 RNF216P1-203ENST00000404404 2427 ntBASIC17.53■□□□□ 0.4
ALDH1A1P00352 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.53■□□□□ 0.4
ALDH1A1P00352 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALDH1A1P00352 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.53■□□□□ 0.4
ALDH1A1P00352 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 AC074138.1-201ENST00000611182 1303 ntBASIC17.52■□□□□ 0.4
ALDH1A1P00352 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 RPS9P1-201ENST00000419943 583 ntBASIC17.52■□□□□ 0.4
ALDH1A1P00352 AC097065.1-201ENST00000425737 517 ntBASIC17.52■□□□□ 0.4
ALDH1A1P00352 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 AP002803.1-201ENST00000528836 498 ntBASIC17.52■□□□□ 0.4
ALDH1A1P00352 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 AC005357.2-202ENST00000590507 1060 ntBASIC17.52■□□□□ 0.4
ALDH1A1P00352 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 AC009955.4-201ENST00000597192 544 ntBASIC17.52■□□□□ 0.4
ALDH1A1P00352 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALDH1A1P00352 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
ALDH1A1P00352 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALDH1A1P00352 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ALDH1A1P00352 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALDH1A1P00352 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.52■□□□□ 0.39
ALDH1A1P00352 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
ALDH1A1P00352 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALDH1A1P00352 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALDH1A1P00352 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.52■□□□□ 0.39
ALDH1A1P00352 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.52■□□□□ 0.39
ALDH1A1P00352 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALDH1A1P00352 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ALDH1A1P00352 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AC139713.2-201ENST00000641328 2723 ntBASIC17.51■□□□□ 0.39
ALDH1A1P00352 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms