Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 AC148477.4-201ENST00000613430 1793 ntBASIC20.49■□□□□ 0.87
APAF1O14727 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.48■□□□□ 0.87
APAF1O14727 AC126365.1-201ENST00000578585 1514 ntBASIC20.48■□□□□ 0.87
APAF1O14727 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
APAF1O14727 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
APAF1O14727 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.48■□□□□ 0.87
APAF1O14727 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
APAF1O14727 PIN1P1-201ENST00000412108 996 ntBASIC20.48■□□□□ 0.87
APAF1O14727 AL353779.1-201ENST00000434793 351 ntBASIC20.48■□□□□ 0.87
APAF1O14727 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.48■□□□□ 0.87
APAF1O14727 AC123567.1-201ENST00000548294 1261 ntBASIC20.48■□□□□ 0.87
APAF1O14727 RRP7BP-205ENST00000566851 833 ntBASIC20.48■□□□□ 0.87
APAF1O14727 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.48■□□□□ 0.87
APAF1O14727 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.48■□□□□ 0.87
APAF1O14727 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.48■□□□□ 0.87
APAF1O14727 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.48■□□□□ 0.87
APAF1O14727 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.48■□□□□ 0.87
APAF1O14727 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
APAF1O14727 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.48■□□□□ 0.87
APAF1O14727 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APAF1O14727 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.48■□□□□ 0.87
APAF1O14727 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
APAF1O14727 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
APAF1O14727 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 AC023157.3-201ENST00000619086 2088 ntBASIC20.47■□□□□ 0.87
APAF1O14727 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.47■□□□□ 0.87
APAF1O14727 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
APAF1O14727 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.47■□□□□ 0.87
APAF1O14727 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.47■□□□□ 0.87
APAF1O14727 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.47■□□□□ 0.87
APAF1O14727 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.47■□□□□ 0.87
APAF1O14727 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
APAF1O14727 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
APAF1O14727 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
APAF1O14727 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
APAF1O14727 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.46■□□□□ 0.87
APAF1O14727 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 DRD5P1-201ENST00000456605 1438 ntBASIC20.46■□□□□ 0.87
APAF1O14727 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.46■□□□□ 0.87
APAF1O14727 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
APAF1O14727 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.46■□□□□ 0.87
APAF1O14727 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.46■□□□□ 0.87
APAF1O14727 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.46■□□□□ 0.87
APAF1O14727 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.46■□□□□ 0.87
APAF1O14727 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.46■□□□□ 0.87
APAF1O14727 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.46■□□□□ 0.87
APAF1O14727 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.46■□□□□ 0.87
APAF1O14727 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 WASH4P-201ENST00000564273 1246 ntBASIC20.46■□□□□ 0.87
APAF1O14727 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.46■□□□□ 0.87
APAF1O14727 BRI3BPP1-201ENST00000594224 787 ntBASIC20.46■□□□□ 0.87
APAF1O14727 AL049840.4-201ENST00000602422 811 ntBASIC20.46■□□□□ 0.87
APAF1O14727 AC093726.1-201ENST00000608064 963 ntBASIC20.46■□□□□ 0.87
APAF1O14727 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.46■□□□□ 0.87
APAF1O14727 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
APAF1O14727 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.46■□□□□ 0.87
APAF1O14727 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.46■□□□□ 0.87
APAF1O14727 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APAF1O14727 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms