Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.34■□□□□ 0.21
SOX1O00570 LINC00634-202ENST00000505157 222 ntBASIC16.34■□□□□ 0.21
SOX1O00570 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.34■□□□□ 0.21
SOX1O00570 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.34■□□□□ 0.21
SOX1O00570 MIR4683-201ENST00000579659 81 ntBASIC16.34■□□□□ 0.21
SOX1O00570 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.34■□□□□ 0.21
SOX1O00570 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.34■□□□□ 0.21
SOX1O00570 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SOX1O00570 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SOX1O00570 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SOX1O00570 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.34■□□□□ 0.21
SOX1O00570 AC004554.1-201ENST00000422830 1468 ntBASIC16.34■□□□□ 0.21
SOX1O00570 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SOX1O00570 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
SOX1O00570 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SOX1O00570 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SOX1O00570 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SOX1O00570 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SOX1O00570 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
SOX1O00570 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.33■□□□□ 0.21
SOX1O00570 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SOX1O00570 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SOX1O00570 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SOX1O00570 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SOX1O00570 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SOX1O00570 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.33■□□□□ 0.2
SOX1O00570 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 AL627422.1-201ENST00000434104 580 ntBASIC16.33■□□□□ 0.2
SOX1O00570 VDAC1P1-201ENST00000439229 848 ntBASIC16.33■□□□□ 0.2
SOX1O00570 HLA-J-204ENST00000495278 958 ntBASIC16.33■□□□□ 0.2
SOX1O00570 AC008723.1-201ENST00000506922 207 ntBASIC16.33■□□□□ 0.2
SOX1O00570 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.33■□□□□ 0.2
SOX1O00570 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.33■□□□□ 0.2
SOX1O00570 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 AL139339.2-201ENST00000608063 657 ntBASIC16.33■□□□□ 0.2
SOX1O00570 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SOX1O00570 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SOX1O00570 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX1O00570 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SOX1O00570 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 FZD10-202ENST00000539839 3282 ntBASIC16.32■□□□□ 0.2
SOX1O00570 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX1O00570 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 HIST2H2BA-201ENST00000412169 381 ntBASIC16.32■□□□□ 0.2
SOX1O00570 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX1O00570 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX1O00570 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 FAM86B3P-203ENST00000523992 854 ntBASIC16.32■□□□□ 0.2
SOX1O00570 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX1O00570 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX1O00570 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX1O00570 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.32■□□□□ 0.2
SOX1O00570 AC004686.1-201ENST00000605113 538 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms