Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC28A1O00337 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 AL136379.1-201ENST00000623471 2642 ntBASIC15.07■□□□□ 0
SLC28A1O00337 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.07■□□□□ 0
SLC28A1O00337 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.07■□□□□ 0
SLC28A1O00337 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.07■□□□□ 0
SLC28A1O00337 MTND6P24-201ENST00000440466 518 ntBASIC15.07■□□□□ 0
SLC28A1O00337 TARDBPP1-201ENST00000442013 1203 ntBASIC15.07■□□□□ 0
SLC28A1O00337 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.07■□□□□ 0
SLC28A1O00337 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.07■□□□□ 0
SLC28A1O00337 AC026150.2-201ENST00000564693 1156 ntBASIC15.07■□□□□ 0
SLC28A1O00337 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.07■□□□□ 0
SLC28A1O00337 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.07■□□□□ 0
SLC28A1O00337 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SLC28A1O00337 AC004835.2-201ENST00000603762 682 ntBASIC15.07■□□□□ 0
SLC28A1O00337 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.07■□□□□ 0
SLC28A1O00337 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SLC28A1O00337 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.07■□□□□ 0
SLC28A1O00337 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A1O00337 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC28A1O00337 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A1O00337 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 GPS2P2-201ENST00000430745 888 ntBASIC15.06■□□□□ 0
SLC28A1O00337 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A1O00337 SPDYE14P-201ENST00000442619 822 ntBASIC15.06■□□□□ 0
SLC28A1O00337 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A1O00337 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
SLC28A1O00337 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A1O00337 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A1O00337 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.06■□□□□ 0
SLC28A1O00337 MIR3687-2-201ENST00000577708 61 ntBASIC15.06■□□□□ 0
SLC28A1O00337 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 MIR3687-1-201ENST00000614492 61 ntBASIC15.06■□□□□ 0
SLC28A1O00337 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A1O00337 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A1O00337 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC28A1O00337 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC28A1O00337 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A1O00337 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A1O00337 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms