Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 KRT17P8-201ENST00000540749 863 ntBASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA2E9PIF3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 PHKG1P2-201ENST00000457537 863 ntBASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AC092552.1-201ENST00000547243 906 ntBASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 RAB43P1-201ENST00000561790 589 ntBASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AL450472.2-201ENST00000603663 1156 ntBASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AC017083.2-201ENST00000608069 979 ntBASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 AL162274.1-201ENST00000617191 1098 ntBASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NPIPA2E9PIF3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms