Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AL589987.1-201ENST00000453380 819 ntBASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 TPRX2P-201ENST00000535362 881 ntBASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 CHCHD2P3-201ENST00000603038 451 ntBASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AL391825.1-201ENST00000457671 1364 ntBASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 TNRC18P2-201ENST00000417666 2714 ntBASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 TARDBPP1-201ENST00000442013 1203 ntBASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 AC244107.1-201ENST00000442033 332 ntBASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 AC091951.1-201ENST00000512854 2465 ntBASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 CR383656.12-201ENST00000549567 513 ntBASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPDC1A2A3K4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 KRT8P44-201ENST00000441609 1350 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms