Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AL589739.1-201ENST00000607720 493 ntBASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 MIR6069-201ENST00000620069 79 ntBASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 CICP14-201ENST00000629111 2732 ntBASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 AC106881.1-201ENST00000605849 3329 ntBASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 AL607033.1-201ENST00000623900 1599 ntBASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 HIST3H2BA-201ENST00000436555 524 ntBASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 SERBP1P3-201ENST00000459980 809 ntBASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA11Q9Y5H2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA11Q9Y5H2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA11Q9Y5H2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA11Q9Y5H2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA11Q9Y5H2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGA11Q9Y5H2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA11Q9Y5H2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms