Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 DBET-201ENST00000630918 3363 ntBASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 TDH-203ENST00000531764 1110 ntBASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 AL583810.1-201ENST00000553344 1045 ntBASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 TUBB1P2-201ENST00000422712 1306 ntBASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 TUBB1P1-201ENST00000503144 1300 ntBASIC14.65□□□□□ -0.06
PCDHGA9Q9Y5G4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
PCDHGA9Q9Y5G4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AC005229.1-201ENST00000392885 409 ntBASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 FO681548.1-201ENST00000455617 1132 ntBASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 FAM86LP-201ENST00000478302 853 ntBASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 RNA5SP412-201ENST00000516234 123 ntBASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AL606495.2-201ENST00000605867 535 ntBASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA9Q9Y5G4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms