Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 AL139094.1-201ENST00000405549 1188 ntBASIC22.22■■□□□ 1.15
STAG3Q9UJ98 AL008707.1-201ENST00000422498 534 ntBASIC22.22■■□□□ 1.15
STAG3Q9UJ98 AC012497.1-201ENST00000429392 575 ntBASIC22.22■■□□□ 1.15
STAG3Q9UJ98 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 FTLP10-202ENST00000505798 471 ntBASIC22.22■■□□□ 1.15
STAG3Q9UJ98 AC134698.3-201ENST00000523880 214 ntBASIC22.22■■□□□ 1.15
STAG3Q9UJ98 RN7SL713P-201ENST00000582127 302 ntBASIC22.22■■□□□ 1.15
STAG3Q9UJ98 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 INO80C-210ENST00000590757 595 ntTSL 2 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 MIR7845-201ENST00000618396 99 ntBASIC22.22■■□□□ 1.15
STAG3Q9UJ98 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
STAG3Q9UJ98 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 FTLP1-201ENST00000449155 526 ntBASIC22.21■■□□□ 1.15
STAG3Q9UJ98 AC005740.2-201ENST00000511085 419 ntBASIC22.21■■□□□ 1.15
STAG3Q9UJ98 NCK2-206ENST00000522586 490 ntTSL 5 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 RN7SL774P-201ENST00000577467 290 ntBASIC22.21■■□□□ 1.15
STAG3Q9UJ98 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 TUBBP5-203ENST00000508529 1334 ntBASIC22.21■■□□□ 1.15
STAG3Q9UJ98 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 AC018695.7-201ENST00000624587 2492 ntBASIC22.21■■□□□ 1.15
STAG3Q9UJ98 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 MFF-204ENST00000353339 2186 ntTSL 5 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
STAG3Q9UJ98 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
STAG3Q9UJ98 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
STAG3Q9UJ98 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
STAG3Q9UJ98 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 CRCP-204ENST00000398684 492 ntTSL 2 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 AC104457.1-201ENST00000401024 814 ntBASIC22.2■■□□□ 1.14
STAG3Q9UJ98 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 MTND4LP12-201ENST00000448237 295 ntBASIC22.2■■□□□ 1.14
STAG3Q9UJ98 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 FADS2-212ENST00000522639 360 ntTSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 FADS2-215ENST00000574708 385 ntTSL 3 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 MIR3907-201ENST00000579424 151 ntBASIC22.2■■□□□ 1.14
STAG3Q9UJ98 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 CFTRP2-201ENST00000634304 199 ntBASIC22.2■■□□□ 1.14
STAG3Q9UJ98 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
STAG3Q9UJ98 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms