Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 AL590640.2-201ENST00000457038 527 ntBASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 AC025279.2-201ENST00000569730 653 ntBASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 AL596257.1-201ENST00000641463 2694 ntBASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AC068418.2-201ENST00000577309 3703 ntBASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AL158070.2-201ENST00000623713 1621 ntBASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 BTNL10-201ENST00000595971 695 ntBASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 AC133552.6-201ENST00000613406 534 ntBASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KIAA1549Q9HCM3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
KIAA1549Q9HCM3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms