Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 PDIA3P2-201ENST00000428073 158 ntBASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 PUDPP3-201ENST00000445368 636 ntBASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 AC090164.2-201ENST00000611487 516 ntBASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CNTNAP4Q9C0A0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 RPL5P21-201ENST00000404620 815 ntBASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AC010141.1-201ENST00000411585 623 ntBASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AC116345.2-201ENST00000512837 523 ntBASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AL160314.3-201ENST00000556041 767 ntBASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AC020922.3-201ENST00000595064 547 ntBASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AL136301.1-201ENST00000615830 422 ntBASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AL157791.1-201ENST00000553667 1699 ntBASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP4Q9C0A0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 ISCA2P1-201ENST00000425548 448 ntBASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 CEP164P1-201ENST00000455142 418 ntBASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 AP003419.4-201ENST00000616071 517 ntBASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 AC002472.3-201ENST00000640124 621 ntBASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 AC005332.8-201ENST00000622750 2735 ntBASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.28■□□□□ 0.68
CNTNAP4Q9C0A0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms