Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC007950.2-201ENST00000615045 2347 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC144831.1-201ENST00000573312 2656 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC022494.1-201ENST00000466044 728 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC104989.1-201ENST00000519711 778 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC068587.3-201ENST00000526613 355 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 RRP7BP-205ENST00000566851 833 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC016180.1-201ENST00000567945 403 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 GNRHR2-203ENST00000581100 1187 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 AC233724.13-201ENST00000598383 410 ntBASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms