Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC112504.1-201ENST00000623415 1841 ntBASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC091046.1-201ENST00000331871 207 ntBASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 HIST2H2BB-201ENST00000449108 381 ntBASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AL391280.1-201ENST00000506969 1062 ntBASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC106820.3-201ENST00000561653 397 ntBASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AP001002.3-201ENST00000623482 206 ntBASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTFDC1Q9BY42 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 MPRIPP1-201ENST00000452433 1089 ntBASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 TMEM198B-204ENST00000484016 896 ntBASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 AC245884.6-201ENST00000515672 1067 ntBASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 AC022217.1-201ENST00000521069 738 ntBASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 RN7SL774P-201ENST00000577467 290 ntBASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 AC128714.1-201ENST00000637035 887 ntBASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTFDC1Q9BY42 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RTFDC1Q9BY42 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RTFDC1Q9BY42 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 AC100850.1-201ENST00000506768 649 ntBASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 AL603832.2-201ENST00000566195 2125 ntBASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RTFDC1Q9BY42 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms