Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 AL928921.2-201ENST00000641325 2442 ntBASIC15.27■□□□□ 0.03
EBF4Q9BQW3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.27■□□□□ 0.03
EBF4Q9BQW3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 EEF1DP4-201ENST00000446006 880 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 RNA5SP415-201ENST00000517246 115 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 AC105233.2-201ENST00000523697 349 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 AF228730.5-201ENST00000530288 346 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 AC018845.2-201ENST00000568326 409 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 AC116407.3-201ENST00000623905 1129 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 AL607033.1-201ENST00000623900 1599 ntBASIC15.26■□□□□ 0.03
EBF4Q9BQW3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF4Q9BQW3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 AC018529.2-202ENST00000611482 3087 ntBASIC15.25■□□□□ 0.03
EBF4Q9BQW3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 AC079781.3-201ENST00000449110 356 ntBASIC15.25■□□□□ 0.03
EBF4Q9BQW3 KRT19P2-202ENST00000557173 1012 ntBASIC15.25■□□□□ 0.03
EBF4Q9BQW3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 AC079781.5-202ENST00000641784 3743 ntBASIC15.25■□□□□ 0.03
EBF4Q9BQW3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
EBF4Q9BQW3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms