Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 CR383656.2-201ENST00000548656 2254 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SNX18Q96RF0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX18Q96RF0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.33□□□□□ -0.11
SNX18Q96RF0 AL691432.1-201ENST00000596308 1422 ntBASIC14.33□□□□□ -0.11
SNX18Q96RF0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX18Q96RF0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.11
SNX18Q96RF0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX18Q96RF0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 AC254562.1-201ENST00000417586 456 ntBASIC14.33□□□□□ -0.12
SNX18Q96RF0 AC142381.1-201ENST00000426099 345 ntBASIC14.33□□□□□ -0.12
SNX18Q96RF0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 AL138918.1-201ENST00000568306 659 ntBASIC14.33□□□□□ -0.12
SNX18Q96RF0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 OR2I1P-210ENST00000642037 4691 ntBASIC14.33□□□□□ -0.12
SNX18Q96RF0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX18Q96RF0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNX18Q96RF0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AC004987.2-201ENST00000395959 1148 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 TFAMP1-201ENST00000412727 736 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 AL671277.1-201ENST00000429656 993 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AL135744.1-201ENST00000565098 629 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AC027307.2-201ENST00000591252 911 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 AC134407.2-201ENST00000625089 1978 ntBASIC14.32□□□□□ -0.12
SNX18Q96RF0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms