Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 AC013268.4-201ENST00000637413 2228 ntBASIC12.97□□□□□ -0.33
GAFA1Q96PS6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 RN7SL399P-201ENST00000471648 279 ntBASIC12.97□□□□□ -0.33
GAFA1Q96PS6 FAM86LP-201ENST00000478302 853 ntBASIC12.97□□□□□ -0.33
GAFA1Q96PS6 TERF1P3-201ENST00000505638 1227 ntBASIC12.97□□□□□ -0.33
GAFA1Q96PS6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 RRP7BP-205ENST00000566851 833 ntBASIC12.97□□□□□ -0.33
GAFA1Q96PS6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 AC099568.2-201ENST00000609194 695 ntBASIC12.97□□□□□ -0.33
GAFA1Q96PS6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.96□□□□□ -0.33
GAFA1Q96PS6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms