Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 AC123567.1-201ENST00000548294 1261 ntBASIC14.82□□□□□ -0.04
TM9SF4Q92544 RAB43P1-201ENST00000561790 589 ntBASIC14.82□□□□□ -0.04
TM9SF4Q92544 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 CHCHD2P3-201ENST00000603038 451 ntBASIC14.82□□□□□ -0.04
TM9SF4Q92544 IGHV3-72-202ENST00000621503 303 ntBASIC14.82□□□□□ -0.04
TM9SF4Q92544 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 AL109936.8-201ENST00000641772 604 ntBASIC14.82□□□□□ -0.04
TM9SF4Q92544 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 AC006058.4-201ENST00000624016 1670 ntBASIC14.81□□□□□ -0.04
TM9SF4Q92544 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 TTTY23B-201ENST00000442790 549 ntBASIC14.81□□□□□ -0.04
TM9SF4Q92544 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TM9SF4Q92544 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TM9SF4Q92544 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 HLA-V-201ENST00000429037 534 ntBASIC14.8□□□□□ -0.04
TM9SF4Q92544 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms