Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF138Q8WVD3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 GNRHR2-203ENST00000581100 1187 ntBASIC13.97□□□□□ -0.17
RNF138Q8WVD3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 AC023157.3-201ENST00000619086 2088 ntBASIC13.97□□□□□ -0.17
RNF138Q8WVD3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF138Q8WVD3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 AC092933.1-201ENST00000393644 945 ntBASIC13.96□□□□□ -0.17
RNF138Q8WVD3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 TDH-203ENST00000531764 1110 ntBASIC13.96□□□□□ -0.17
RNF138Q8WVD3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 AC233724.13-201ENST00000598383 410 ntBASIC13.96□□□□□ -0.17
RNF138Q8WVD3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 AL035252.4-201ENST00000624174 288 ntBASIC13.96□□□□□ -0.17
RNF138Q8WVD3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF138Q8WVD3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms