Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 AL589987.1-201ENST00000453380 819 ntBASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 AL158212.4-201ENST00000624062 1286 ntBASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 AC087481.3-201ENST00000602886 1894 ntBASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 AL121723.1-201ENST00000445194 1519 ntBASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC148Q8NFR7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 MEP1AP4-201ENST00000423244 1087 ntBASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 SPTLC1P1-201ENST00000447199 261 ntBASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 AC093004.1-201ENST00000508850 424 ntBASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 SERBP1P5-201ENST00000510079 1181 ntBASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 TPRX2P-201ENST00000535362 881 ntBASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 AC004790.1-201ENST00000612686 536 ntBASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 AC092384.3-202ENST00000564646 2873 ntBASIC18.02■□□□□ 0.48
CCDC148Q8NFR7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC148Q8NFR7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 SPDYE19P-201ENST00000338590 713 ntBASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 MIR4745-201ENST00000577608 62 ntBASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms