Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KRT17P6-201ENST00000453795 1220 ntBASIC13.08□□□□□ -0.32
ZNF546Q86UE3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 AC079776.2-201ENST00000641154 1609 ntBASIC13.08□□□□□ -0.32
ZNF546Q86UE3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 AC127383.1-201ENST00000444697 1800 ntBASIC13.08□□□□□ -0.32
ZNF546Q86UE3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 AL356585.2-201ENST00000625078 2396 ntBASIC13.08□□□□□ -0.32
ZNF546Q86UE3 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.08□□□□□ -0.32
ZNF546Q86UE3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 AC005562.1-201ENST00000583030 3219 ntBASIC13.07□□□□□ -0.32
ZNF546Q86UE3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 POM121L3P-201ENST00000419331 1163 ntBASIC13.07□□□□□ -0.32
ZNF546Q86UE3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 DRAXINP1-201ENST00000437611 948 ntBASIC13.07□□□□□ -0.32
ZNF546Q86UE3 AC104076.2-201ENST00000448912 469 ntBASIC13.07□□□□□ -0.32
ZNF546Q86UE3 PAWRP1-201ENST00000451083 565 ntBASIC13.07□□□□□ -0.32
ZNF546Q86UE3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF546Q86UE3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 NCF1C-201ENST00000438382 1427 ntBASIC13.06□□□□□ -0.32
ZNF546Q86UE3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms