Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 AC090616.6-203ENST00000579186 1945 ntBASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 REXO1L2P-201ENST00000425429 2069 ntBASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 AC242376.1-201ENST00000559033 726 ntBASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 HLA-C-210ENST00000640219 976 ntBASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 AC244394.1-201ENST00000435000 1665 ntBASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 AL360270.3-201ENST00000609118 1348 ntBASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13DQ5THJ4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 AL137783.1-201ENST00000623494 1896 ntBASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 AC007274.2-201ENST00000421675 662 ntBASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 AC105250.1-201ENST00000509378 2057 ntBASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 AC092127.1-201ENST00000567093 3455 ntBASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13DQ5THJ4 AC010491.1-201ENST00000563101 2797 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC020910.5-201ENST00000623668 1865 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AP000593.2-201ENST00000542775 1433 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC007881.3-201ENST00000608897 607 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC026471.1-201ENST00000564629 3026 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC006449.5-201ENST00000610658 2098 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 OR2K2-202ENST00000374428 1038 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC026410.1-201ENST00000507366 1101 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AL132994.2-201ENST00000603120 687 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC091544.8-201ENST00000619490 361 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC051619.9-201ENST00000623237 597 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC005618.3-201ENST00000624928 458 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms