Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.89■□□□□ 0.45
USH1GQ495M9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.89■□□□□ 0.45
USH1GQ495M9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 AC007274.1-201ENST00000439805 662 ntBASIC17.89■□□□□ 0.45
USH1GQ495M9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.89■□□□□ 0.45
USH1GQ495M9 BCRP2-202ENST00000447763 634 ntBASIC17.89■□□□□ 0.45
USH1GQ495M9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.89■□□□□ 0.45
USH1GQ495M9 BCRP6-201ENST00000510112 632 ntBASIC17.89■□□□□ 0.45
USH1GQ495M9 BCRP7-201ENST00000511549 544 ntBASIC17.89■□□□□ 0.45
USH1GQ495M9 AP001582.1-201ENST00000525856 295 ntBASIC17.89■□□□□ 0.45
USH1GQ495M9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.89■□□□□ 0.45
USH1GQ495M9 PTP4A1P2-201ENST00000546033 454 ntBASIC17.89■□□□□ 0.45
USH1GQ495M9 SNX29P1-201ENST00000548357 1007 ntBASIC17.89■□□□□ 0.45
USH1GQ495M9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.89■□□□□ 0.45
USH1GQ495M9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.89■□□□□ 0.45
USH1GQ495M9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.89■□□□□ 0.45
USH1GQ495M9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.89■□□□□ 0.45
USH1GQ495M9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.89■□□□□ 0.45
USH1GQ495M9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.89■□□□□ 0.45
USH1GQ495M9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.89■□□□□ 0.45
USH1GQ495M9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USH1GQ495M9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USH1GQ495M9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 FER1L4-210ENST00000615531 5998 ntBASIC17.88■□□□□ 0.45
USH1GQ495M9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 AP005117.1-202ENST00000581724 1908 ntBASIC17.88■□□□□ 0.45
USH1GQ495M9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
USH1GQ495M9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
USH1GQ495M9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.88■□□□□ 0.45
USH1GQ495M9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 AC068587.3-201ENST00000526613 355 ntBASIC17.88■□□□□ 0.45
USH1GQ495M9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.88■□□□□ 0.45
USH1GQ495M9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.88■□□□□ 0.45
USH1GQ495M9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USH1GQ495M9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1GQ495M9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
USH1GQ495M9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 AC022188.1-201ENST00000620960 1664 ntBASIC17.87■□□□□ 0.45
USH1GQ495M9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1GQ495M9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1GQ495M9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
USH1GQ495M9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms