Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH17Q12864 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH17Q12864 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH17Q12864 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH17Q12864 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH17Q12864 AC107890.1-201ENST00000422478 521 ntBASIC15.81■□□□□ 0.12
CDH17Q12864 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH17Q12864 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH17Q12864 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH17Q12864 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH17Q12864 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH17Q12864 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 AL512361.1-201ENST00000554200 418 ntBASIC15.81■□□□□ 0.12
CDH17Q12864 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDH17Q12864 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH17Q12864 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.81■□□□□ 0.12
CDH17Q12864 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH17Q12864 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH17Q12864 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CDH17Q12864 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH17Q12864 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH17Q12864 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH17Q12864 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH17Q12864 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 AC010336.2-201ENST00000564226 506 ntBASIC15.8■□□□□ 0.12
CDH17Q12864 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH17Q12864 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 AC074044.1-201ENST00000609673 707 ntBASIC15.8■□□□□ 0.12
CDH17Q12864 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH17Q12864 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDH17Q12864 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CDH17Q12864 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH17Q12864 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH17Q12864 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH17Q12864 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH17Q12864 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
CDH17Q12864 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 AL133267.1-201ENST00000398220 340 ntBASIC15.79■□□□□ 0.12
CDH17Q12864 AC015922.1-201ENST00000421102 1152 ntBASIC15.79■□□□□ 0.12
CDH17Q12864 RPL13P2-201ENST00000440687 659 ntBASIC15.79■□□□□ 0.12
CDH17Q12864 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH17Q12864 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH17Q12864 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH17Q12864 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms