Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC3A1Q07837 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC3A1Q07837 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC3A1Q07837 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC3A1Q07837 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 ALG1L5P-201ENST00000482043 771 ntBASIC14.15□□□□□ -0.14
SLC3A1Q07837 KRT18P34-201ENST00000488218 1270 ntBASIC14.15□□□□□ -0.14
SLC3A1Q07837 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 AP002472.1-201ENST00000577490 586 ntBASIC14.15□□□□□ -0.14
SLC3A1Q07837 AC134684.3-201ENST00000641758 218 ntBASIC14.15□□□□□ -0.14
SLC3A1Q07837 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.15□□□□□ -0.14
SLC3A1Q07837 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC3A1Q07837 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC3A1Q07837 AC139749.1-202ENST00000617529 3139 ntBASIC14.15□□□□□ -0.14
SLC3A1Q07837 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SLC3A1Q07837 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
SLC3A1Q07837 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC3A1Q07837 AC109635.5-201ENST00000533593 962 ntBASIC14.14□□□□□ -0.15
SLC3A1Q07837 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 MIR4321-201ENST00000592276 80 ntBASIC14.14□□□□□ -0.15
SLC3A1Q07837 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC3A1Q07837 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms