Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP1Q00587 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP1Q00587 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP1Q00587 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDC42EP1Q00587 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC42EP1Q00587 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 AC006001.1-201ENST00000325130 474 ntBASIC16.92■□□□□ 0.3
CDC42EP1Q00587 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 AL139094.1-201ENST00000405549 1188 ntBASIC16.92■□□□□ 0.3
CDC42EP1Q00587 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 AL583810.1-201ENST00000553344 1045 ntBASIC16.92■□□□□ 0.3
CDC42EP1Q00587 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 TUBB1P2-201ENST00000422712 1306 ntBASIC16.92■□□□□ 0.3
CDC42EP1Q00587 TUBB1P1-201ENST00000503144 1300 ntBASIC16.92■□□□□ 0.3
CDC42EP1Q00587 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP1Q00587 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AL138709.1-201ENST00000614840 1693 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AC099336.1-201ENST00000417053 1171 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 YBX1P6-201ENST00000442962 1002 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 RNA5SP486-201ENST00000515961 83 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 DUX4L45-201ENST00000566406 1057 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 SAMD11P1-201ENST00000571429 661 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AL391005.1-201ENST00000623953 2435 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AC022188.1-201ENST00000620960 1664 ntBASIC16.91■□□□□ 0.3
CDC42EP1Q00587 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP1Q00587 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP1Q00587 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms