Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.37■□□□□ 0.21
IRX4P78413 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
IRX4P78413 GNAQP1-201ENST00000444815 1067 ntBASIC16.37■□□□□ 0.21
IRX4P78413 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.37■□□□□ 0.21
IRX4P78413 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.37■□□□□ 0.21
IRX4P78413 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.37■□□□□ 0.21
IRX4P78413 AC132938.2-201ENST00000579188 680 ntBASIC16.37■□□□□ 0.21
IRX4P78413 AL589739.1-201ENST00000607720 493 ntBASIC16.37■□□□□ 0.21
IRX4P78413 AL591163.1-201ENST00000641757 987 ntBASIC16.37■□□□□ 0.21
IRX4P78413 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 CETN4P-206ENST00000642099 2168 ntBASIC16.37■□□□□ 0.21
IRX4P78413 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
IRX4P78413 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.36■□□□□ 0.21
IRX4P78413 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX4P78413 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX4P78413 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IRX4P78413 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IRX4P78413 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 AC013268.4-201ENST00000637413 2228 ntBASIC16.36■□□□□ 0.21
IRX4P78413 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.36■□□□□ 0.21
IRX4P78413 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX4P78413 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.36■□□□□ 0.21
IRX4P78413 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 HLA-H-201ENST00000383620 1096 ntBASIC16.36■□□□□ 0.21
IRX4P78413 AL353705.2-201ENST00000428243 662 ntBASIC16.36■□□□□ 0.21
IRX4P78413 RPS2P32-201ENST00000439199 892 ntBASIC16.36■□□□□ 0.21
IRX4P78413 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.36■□□□□ 0.21
IRX4P78413 RN7SL752P-201ENST00000463779 287 ntBASIC16.36■□□□□ 0.21
IRX4P78413 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.36■□□□□ 0.21
IRX4P78413 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.36■□□□□ 0.21
IRX4P78413 AC021097.1-201ENST00000607902 574 ntBASIC16.36■□□□□ 0.21
IRX4P78413 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.36■□□□□ 0.21
IRX4P78413 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IRX4P78413 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 SBF1P1-201ENST00000444527 5631 ntBASIC16.36■□□□□ 0.21
IRX4P78413 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.36■□□□□ 0.21
IRX4P78413 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IRX4P78413 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IRX4P78413 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IRX4P78413 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IRX4P78413 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 FOXO1B-201ENST00000504678 1527 ntBASIC16.35■□□□□ 0.21
IRX4P78413 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IRX4P78413 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
IRX4P78413 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 AP006294.1-201ENST00000415407 339 ntBASIC16.35■□□□□ 0.21
IRX4P78413 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.35■□□□□ 0.21
IRX4P78413 AC135586.1-201ENST00000539323 574 ntBASIC16.35■□□□□ 0.21
IRX4P78413 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.35■□□□□ 0.21
IRX4P78413 AC104794.3-201ENST00000566840 1248 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms