Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.46■□□□□ 0.07
SRP54P61011 AL162726.2-201ENST00000438986 1017 ntBASIC15.46■□□□□ 0.07
SRP54P61011 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.46■□□□□ 0.07
SRP54P61011 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.46■□□□□ 0.07
SRP54P61011 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.46■□□□□ 0.07
SRP54P61011 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.46■□□□□ 0.07
SRP54P61011 RAB43P1-201ENST00000561790 589 ntBASIC15.46■□□□□ 0.07
SRP54P61011 AL359711.2-201ENST00000563105 872 ntBASIC15.46■□□□□ 0.07
SRP54P61011 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SRP54P61011 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.46■□□□□ 0.07
SRP54P61011 AC010319.3-201ENST00000597028 470 ntBASIC15.46■□□□□ 0.07
SRP54P61011 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.46■□□□□ 0.07
SRP54P61011 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SRP54P61011 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRP54P61011 CU634019.7-201ENST00000624153 1185 ntBASIC15.46■□□□□ 0.07
SRP54P61011 FP236241.2-201ENST00000624906 1185 ntBASIC15.46■□□□□ 0.07
SRP54P61011 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRP54P61011 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRP54P61011 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.46■□□□□ 0.07
SRP54P61011 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.46■□□□□ 0.07
SRP54P61011 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRP54P61011 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRP54P61011 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SRP54P61011 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SRP54P61011 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.46■□□□□ 0.06
SRP54P61011 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SRP54P61011 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SRP54P61011 AC069224.1-201ENST00000566372 1715 ntBASIC15.46■□□□□ 0.06
SRP54P61011 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
SRP54P61011 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.45■□□□□ 0.06
SRP54P61011 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
SRP54P61011 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 AL121723.1-201ENST00000445194 1519 ntBASIC15.45■□□□□ 0.06
SRP54P61011 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SRP54P61011 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
SRP54P61011 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SRP54P61011 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 AC079776.1-201ENST00000401540 1152 ntBASIC15.45■□□□□ 0.06
SRP54P61011 AC112492.5-201ENST00000421897 457 ntBASIC15.45■□□□□ 0.06
SRP54P61011 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.45■□□□□ 0.06
SRP54P61011 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.45■□□□□ 0.06
SRP54P61011 KRT18P43-201ENST00000469825 1281 ntBASIC15.45■□□□□ 0.06
SRP54P61011 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.45■□□□□ 0.06
SRP54P61011 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 AC015936.2-201ENST00000593177 259 ntBASIC15.45■□□□□ 0.06
SRP54P61011 AL049840.4-201ENST00000602422 811 ntBASIC15.45■□□□□ 0.06
SRP54P61011 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.45■□□□□ 0.06
SRP54P61011 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.45■□□□□ 0.06
SRP54P61011 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.45■□□□□ 0.06
SRP54P61011 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.45■□□□□ 0.06
SRP54P61011 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SRP54P61011 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SRP54P61011 MIR600HG-201ENST00000449175 5984 ntBASIC15.45■□□□□ 0.06
SRP54P61011 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SRP54P61011 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SRP54P61011 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.44■□□□□ 0.06
SRP54P61011 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.44■□□□□ 0.06
SRP54P61011 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.44■□□□□ 0.06
SRP54P61011 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 AC006449.5-201ENST00000610658 2098 ntBASIC15.44■□□□□ 0.06
SRP54P61011 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
SRP54P61011 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SRP54P61011 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.44■□□□□ 0.06
SRP54P61011 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 ACA64.2-201ENST00000459014 129 ntBASIC15.44■□□□□ 0.06
SRP54P61011 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms