Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN8P56748 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 CICP11-201ENST00000434745 2827 ntBASIC14.88□□□□□ -0.03
CLDN8P56748 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CLDN8P56748 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 AP000344.2-201ENST00000512987 629 ntBASIC14.88□□□□□ -0.03
CLDN8P56748 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN8P56748 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN8P56748 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN8P56748 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN8P56748 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN8P56748 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN8P56748 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN8P56748 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN8P56748 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN8P56748 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN8P56748 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 FAM8A3P-201ENST00000427218 844 ntBASIC14.87□□□□□ -0.03
CLDN8P56748 MTND6P24-201ENST00000440466 518 ntBASIC14.87□□□□□ -0.03
CLDN8P56748 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN8P56748 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN8P56748 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN8P56748 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN8P56748 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms