Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 MTX1P1-201ENST00000440904 838 ntBASIC14.97□□□□□ -0.01
CLDN6P56747 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN6P56747 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN6P56747 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CLDN6P56747 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.97□□□□□ -0.01
CLDN6P56747 AP006547.1-201ENST00000563435 692 ntBASIC14.97□□□□□ -0.01
CLDN6P56747 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN6P56747 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN6P56747 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN6P56747 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN6P56747 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN6P56747 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLDN6P56747 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
CLDN6P56747 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CLDN6P56747 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN6P56747 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLDN6P56747 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN6P56747 HOMER2P2-201ENST00000451621 847 ntBASIC14.96□□□□□ -0.01
CLDN6P56747 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.96□□□□□ -0.01
CLDN6P56747 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CLDN6P56747 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN6P56747 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CLDN6P56747 ECM1P1-201ENST00000604092 1279 ntBASIC14.96□□□□□ -0.01
CLDN6P56747 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN6P56747 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CLDN6P56747 AC244452.3-201ENST00000636814 210 ntBASIC14.96□□□□□ -0.01
CLDN6P56747 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 AL139384.1-201ENST00000612143 3047 ntBASIC14.96□□□□□ -0.01
CLDN6P56747 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN6P56747 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN6P56747 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN6P56747 AL138709.1-201ENST00000614840 1693 ntBASIC14.96□□□□□ -0.01
CLDN6P56747 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN6P56747 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN6P56747 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN6P56747 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN6P56747 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.96□□□□□ -0.02
CLDN6P56747 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
CLDN6P56747 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN6P56747 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN6P56747 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN6P56747 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN6P56747 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN6P56747 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CLDN6P56747 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CLDN6P56747 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms