Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FOXG1P55316 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FOXG1P55316 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXG1P55316 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
FOXG1P55316 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXG1P55316 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXG1P55316 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FOXG1P55316 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXG1P55316 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXG1P55316 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXG1P55316 AC005034.1-201ENST00000426657 489 ntBASIC13.66□□□□□ -0.22
FOXG1P55316 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXG1P55316 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.66□□□□□ -0.22
FOXG1P55316 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXG1P55316 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXG1P55316 RN7SL837P-201ENST00000463010 287 ntBASIC13.66□□□□□ -0.22
FOXG1P55316 RN7SL752P-201ENST00000463779 287 ntBASIC13.66□□□□□ -0.22
FOXG1P55316 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.66□□□□□ -0.22
FOXG1P55316 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.66□□□□□ -0.22
FOXG1P55316 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.66□□□□□ -0.22
FOXG1P55316 RPSAP52-203ENST00000622976 1023 ntBASIC13.66□□□□□ -0.22
FOXG1P55316 AL035252.4-201ENST00000624174 288 ntBASIC13.66□□□□□ -0.22
FOXG1P55316 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXG1P55316 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
FOXG1P55316 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXG1P55316 INTS4P2-202ENST00000614726 2019 ntBASIC13.66□□□□□ -0.22
FOXG1P55316 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
FOXG1P55316 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXG1P55316 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FOXG1P55316 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.66□□□□□ -0.22
FOXG1P55316 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
FOXG1P55316 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
FOXG1P55316 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXG1P55316 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
FOXG1P55316 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 AC134915.1-201ENST00000426461 574 ntBASIC13.65□□□□□ -0.22
FOXG1P55316 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FOXG1P55316 AL442647.2-201ENST00000429864 857 ntBASIC13.65□□□□□ -0.22
FOXG1P55316 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.65□□□□□ -0.22
FOXG1P55316 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXG1P55316 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXG1P55316 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
FOXG1P55316 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXG1P55316 AC120045.2-201ENST00000567334 178 ntBASIC13.65□□□□□ -0.22
FOXG1P55316 AC124283.3-201ENST00000570869 594 ntBASIC13.65□□□□□ -0.22
FOXG1P55316 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXG1P55316 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.65□□□□□ -0.22
FOXG1P55316 AC107373.2-201ENST00000607735 490 ntBASIC13.65□□□□□ -0.22
FOXG1P55316 AL033527.5-201ENST00000641382 801 ntBASIC13.65□□□□□ -0.22
FOXG1P55316 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms