Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1DP48730 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.59■□□□□ 0.09
CSNK1DP48730 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1DP48730 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1DP48730 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1DP48730 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CSNK1DP48730 AC126365.1-201ENST00000578585 1514 ntBASIC15.58■□□□□ 0.09
CSNK1DP48730 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSNK1DP48730 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSNK1DP48730 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.58■□□□□ 0.09
CSNK1DP48730 AC007787.1-201ENST00000588095 1583 ntBASIC15.58■□□□□ 0.09
CSNK1DP48730 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.58■□□□□ 0.08
CSNK1DP48730 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.58■□□□□ 0.08
CSNK1DP48730 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.58■□□□□ 0.08
CSNK1DP48730 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.58■□□□□ 0.08
CSNK1DP48730 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
CSNK1DP48730 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.58■□□□□ 0.08
CSNK1DP48730 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CSNK1DP48730 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 BX539320.1-201ENST00000623759 877 ntBASIC15.58■□□□□ 0.08
CSNK1DP48730 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.58■□□□□ 0.08
CSNK1DP48730 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CSNK1DP48730 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1DP48730 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.58■□□□□ 0.08
CSNK1DP48730 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1DP48730 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 AC136621.1-201ENST00000624017 2304 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.57■□□□□ 0.08
CSNK1DP48730 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 KRT17P7-201ENST00000451704 1104 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CSNK1DP48730 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 AC132938.2-201ENST00000579188 680 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 AC015936.2-201ENST00000593177 259 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 AC010319.3-201ENST00000597028 470 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.57■□□□□ 0.08
CSNK1DP48730 AP005019.2-201ENST00000615104 511 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 IGHV3-72-202ENST00000621503 303 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.57■□□□□ 0.08
CSNK1DP48730 AL591163.1-201ENST00000641757 987 ntBASIC15.57■□□□□ 0.08
CSNK1DP48730 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CSNK1DP48730 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.57■□□□□ 0.08
CSNK1DP48730 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CSNK1DP48730 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1DP48730 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1DP48730 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms